The effect of acquisition resolution on orientation decoding from V1 BOLD fMRI at 7T

Publication date: 1 March 2017
Source:NeuroImage, Volume 148
Author(s): Ayan Sengupta, Renat Yakupov, Oliver Speck, Stefan Pollmann, Michael Hanke
A decade after it was shown that the orientation of visual grating stimuli can be decoded from human visual cortex activity by means of multivariate pattern classification of BOLD fMRI data, numerous studies have investigated which aspects of neuronal activity are reflected in BOLD response patterns and are accessible for decoding. However, it remains inconclusive what the effect of acquisition resolution on BOLD fMRI decoding analyses is. The present study is the first to provide empirical ultra high-field fMRI data recorded at four spatial resolutions (0.8mm, 1.4mm, 2mm, and 3mm isotropic voxel size) on this topic — in order to test hypotheses on the strength and spatial scale of orientation discriminating signals. We present detailed analysis, in line with predictions from previous simulation studies, about how the performance of orientation decoding varies with different acquisition resolutions. Moreover, we also examine different spatial filtering procedures and its effects on orientation decoding. Here we show that higher-resolution scans with subsequent down-sampling or low-pass filtering yield no benefit over scans natively recorded in the corresponding lower resolution regarding decoding accuracy. The orientation-related signal in the BOLD fMRI data is spatially broadband in nature, includes both high spatial frequency components, as well as large-scale biases previously proposed in the literature. Moreover, we found above chance-level contribution from large draining veins to orientation decoding. Acquired raw data were publicly released to facilitate further investigation.



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